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Zhengdong Zhang, Ph.D.

Calculated based on number of publications stored in Pure and citations from Scopus
Calculated based on number of publications stored in Pure and citations from Scopus
Calculated based on number of publications stored in Pure and citations from Scopus
19992023

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  • 2023

    Chromatin regulators in the TBX1 network confer risk for conotruncal heart defects in 22q11.2DS

    International 22q11.2 Brain and Behavior Consortium (IBBC), Dec 2023, In: npj Genomic Medicine. 8, 1, 17.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    1 Scopus citations

  • Frailty Resilience Score: A Novel Measure of Frailty Resilience Associated With Protection From Frailty and Survival

    Milman, S., Lerman, B., Ayers, E., Zhang, Z., Sathyan, S., Levine, M., Ye, K., Gao, T., Higgins-Chen, A., Barzilai, N. & Verghese, J., Oct 9 2023, In: The journals of gerontology. Series A, Biological sciences and medical sciences. 78, 10, p. 1771-1777 7 p.

    Research output: Contribution to journal › Article › peer-review

    1 Scopus citations

  • Rare coding variants as risk modifiers of the 22q11.2 deletion implicate postnatal cortical development in syndromic schizophrenia

    Lin, J. R., Zhao, Y., Jabalameli, M. R., Nguyen, N., Mitra, J., Swillen, A., Vorstman, J. A. S., Chow, E. W. C., van den Bree, M., Emanuel, B. S., Vermeesch, J. R., Owen, M. J., Williams, N. M., Bassett, A. S., McDonald-McGinn, D. M., Gur, R. E., Bearden, C. E., Morrow, B. E., Lachman, H. M. & Zhang, Z. D., May 2023, In: Molecular Psychiatry. 28, 5, p. 2071-2080 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    2 Scopus citations
  • 2022

    Protocol for gene annotation, prediction, and validation of genomic gene expansion

    Zhang, Q. & Zhang, Z. D., Dec 16 2022, In: STAR Protocols. 3, 4, 101692.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • Substance abuse and the risk of severe COVID-19: Mendelian randomization confirms the causal role of opioids but hints a negative causal effect for cannabinoids

    Jabalameli, M. R. & Zhang, Z. D., Dec 13 2022, In: Frontiers in Genetics. 13, 1070428.

    Research output: Contribution to journal › Article › peer-review

    Open Access
  • 2021

    Deep post-GWAS analysis identifies potential risk genes and risk variants for Alzheimer’s disease, providing new insights into its disease mechanisms

    Wang, Z., Zhang, Q., Lin, J. R., Jabalameli, M. R., Mitra, J., Nguyen, N. & Zhang, Z. D., Dec 2021, In: Scientific reports. 11, 1, 20511.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    16 Scopus citations

  • Ectopic cervical thymi and no thymic involution until midlife in naked mole rats

    Emmrich, S., Tolibzoda Zakusilo, F., Trapp, A., Zhou, X., Zhang, Q., Irving, E. M., Drage, M. G., Zhang, Z., Gladyshev, V. N., Seluanov, A. & Gorbunova, V., Oct 2021, In: Aging cell. 20, 10, e13477.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    10 Scopus citations

  • Enhancer release and retargeting activates disease-susceptibility genes

    Oh, S., Shao, J., Mitra, J., Xiong, F., D’Antonio, M., Wang, R., Garcia-Bassets, I., Ma, Q., Zhu, X., Lee, J. H., Nair, S. J., Yang, F., Ohgi, K., Frazer, K. A., Zhang, Z. D., Li, W. & Rosenfeld, M. G., Jul 29 2021, In: Nature. 595, 7869, p. 735-740 6 p.

    Research output: Contribution to journal › Article › peer-review

    55 Scopus citations

  • Genetic contributors to risk of schizophrenia in the presence of a 22q11.2 deletion

    International 22q11.2DS Brain and Behavior Consortium, Aug 2021, In: Molecular Psychiatry. 26, 8, p. 4496-4510 15 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    70 Scopus citations

  • Genetic signature of human longevity in PKC and NF-κB signaling

    Ryu, S., Han, J., Norden-Krichmar, T. M., Zhang, Q., Lee, S., Zhang, Z., Atzmon, G., Niedernhofer, L. J., Robbins, P. D., Barzilai, N., Schork, N. J. & Suh, Y., Jul 2021, In: Aging cell. 20, 7, e13362.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    11 Scopus citations

  • Genomic expansion of Aldh1a1 protects beavers against high metabolic aldehydes from lipid oxidation

    Zhang, Q., Tombline, G., Ablaeva, J., Zhang, L., Zhou, X., Smith, Z., Zhao, Y., Xiaoli, A. M., Wang, Z., Lin, J. R., Jabalameli, M. R., Mitra, J., Nguyen, N., Vijg, J., Seluanov, A., Gladyshev, V. N., Gorbunova, V. & Zhang, Z. D., Nov 9 2021, In: Cell Reports. 37, 6, 109965.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    6 Scopus citations

  • Rare genetic coding variants associated with human longevity and protection against age-related diseases

    Regeneron Genetics Center, Sep 2021, In: Nature Aging. 1, 9, p. 783-794 12 p.

    Research output: Contribution to journal › Article › peer-review

    17 Scopus citations

  • Transposon-triggered innate immune response confers cancer resistance to the blind mole rat

    Zhao, Y., Oreskovic, E., Zhang, Q., Lu, Q., Gilman, A., Lin, Y. S., He, J., Zheng, Z., Lu, J. Y., Lee, J., Ke, Z., Ablaeva, J., Sweet, M. J., Horvath, S., Zhang, Z., Nevo, E., Seluanov, A. & Gorbunova, V., Oct 2021, In: Nature Immunology. 22, 10, p. 1219-1230 12 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    39 Scopus citations
  • 2020

    Beaver and Naked Mole Rat Genomes Reveal Common Paths to Longevity

    Zhou, X., Dou, Q., Fan, G., Zhang, Q., Sanderford, M., Kaya, A., Johnson, J., Karlsson, E. K., Tian, X., Mikhalchenko, A., Kumar, S., Seluanov, A., Zhang, Z. D., Gorbunova, V., Liu, X. & Gladyshev, V. N., Jul 28 2020, In: Cell Reports. 32, 4, 107949.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    19 Scopus citations

  • Complete Sequence of the 22q11.2 Allele in 1,053 Subjects with 22q11.2 Deletion Syndrome Reveals Modifiers of Conotruncal Heart Defects

    International 22q11.2 Brain and Behavior Consortium, Jan 2 2020, In: American Journal of Human Genetics. 106, 1, p. 26-40 15 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    41 Scopus citations

  • Inducible aging in Hydra oligactis implicates sexual reproduction, loss of stem cells, and genome maintenance as major pathways

    Sun, S., White, R. R., Fischer, K. E., Zhang, Z., Austad, S. N. & Vijg, J., Aug 1 2020, In: GeroScience. 42, 4, p. 1119-1132 14 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    14 Scopus citations
  • 2019

    SIRT6 Is Responsible for More Efficient DNA Double-Strand Break Repair in Long-Lived Species

    Tian, X., Firsanov, D., Zhang, Z., Cheng, Y., Luo, L., Tombline, G., Tan, R., Simon, M., Henderson, S., Steffan, J., Goldfarb, A., Tam, J., Zheng, K., Cornwell, A., Johnson, A., Yang, J. N., Mao, Z., Manta, B., Dang, W., Zhang, Z., & 8 othersVijg, J., Wolfe, A., Moody, K., Kennedy, B. K., Bohmann, D., Gladyshev, V. N., Seluanov, A. & Gorbunova, V., Apr 18 2019, In: Cell. 177, 3, p. 622-638.e22

    Research output: Contribution to journal › Article › peer-review

    Open Access
    188 Scopus citations

  • The nutritional environment determines which and how intestinal stem cells contribute to homeostasis and tumorigenesis

    Li, W., Zimmerman, S. E., Peregrina, K., Houston, M., Mayoral, J., Zhang, J., Maqbool, S., Zhang, Z., Cai, Y., Ye, K. & Augenlicht, L. H., Aug 22 2019, In: Carcinogenesis. 40, 8, p. 937-946 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    20 Scopus citations
  • 2018

    Epigenetic alterations to Polycomb targets precede malignant transition in a mouse model of breast cancer

    Cai, Y., Lin, J. R., Zhang, Q., O'Brien, K., Montagna, C. & Zhang, Z. D., Dec 1 2018, In: Scientific reports. 8, 1, 5535.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    8 Scopus citations

  • Global, integrated analysis of methylomes and transcriptomes from laser capture microdissected bronchial and alveolar cells in human lung

    Dong, X., Shi, M., Lee, M., Toro, R., Gravina, S., Han, W., Yasuda, S., Wang, T., Zhang, Z., Vijg, J., Suh, Y. & Spivack, S. D., Mar 4 2018, In: Epigenetics. 13, 3, p. 264-274 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    6 Scopus citations

  • HEDD: Human Enhancer Disease Database

    Wang, Z., Zhang, Q., Zhang, W., Lin, J. R., Cai, Y., Mitra, J. & Zhang, Z. D., Jan 1 2018, In: Nucleic acids research. 46, D1, p. D113-D120

    Research output: Contribution to journal › Article › peer-review

    Open Access
    36 Scopus citations

  • PGA: Post-GWAS analysis for disease gene identification

    Lin, J. R., Jaroslawicz, D., Cai, Y., Zhang, Q., Wang, Z. & Zhang, Z. D., May 15 2018, In: Bioinformatics. 34, 10, p. 1786-1788 3 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    5 Scopus citations

  • Variance of IQ is partially dependent on deletion type among 1,427 22q11.2 deletion syndrome subjects

    the International 22q11.2 Brain and Behavior Consortium, Oct 1 2018, In: American Journal of Medical Genetics, Part A. 176, 10, p. 2172-2181 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    28 Scopus citations
  • 2017

    Cyclin C regulates adipogenesis by stimulating transcriptional activity of CCAAT/enhancer-binding protein α

    Song, Z., Xiaoli, A. M., Zhang, Q., Zhang, Y., Yang, E. S. T., Wang, S. E., Chang, R., Zhang, Z. D., Yang, G., Strich, R., Pessin, J. E. & Yang, F., May 26 2017, In: Journal of Biological Chemistry. 292, 21, p. 8918-8932 15 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    10 Scopus citations

  • Integrated rare variant-based risk gene prioritization in disease case-control sequencing studies

    Lin, J. R., Zhang, Q., Cai, Y., Morrow, B. E. & Zhang, Z. D., Dec 2017, In: PLoS genetics. 13, 12, e1007142.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    7 Scopus citations

  • Nested Inversion Polymorphisms Predispose Chromosome 22q11.2 to Meiotic Rearrangements

    International 22q11.2 Brain and Behavior Consortium, Oct 5 2017, In: American Journal of Human Genetics. 101, 4, p. 616-622 7 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    5 Scopus citations

  • Network analysis of mitonuclear GWAS reveals functional networks and tissue expression profiles of disease-associated genes

    Johnson, S. C., Gonzalez, B., Zhang, Q., Milholland, B., Zhang, Z. & Suh, Y., Jan 1 2017, In: Human Genetics. 136, 1, p. 55-65 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    12 Scopus citations

  • Transcriptomic dynamics of breast cancer progression in the MMTV-PyMT mouse model

    Cai, Y., Nogales-Cadenas, R., Zhang, Q., Lin, J. R., Zhang, W., O'Brien, K., Montagna, C. & Zhang, Z. D., Feb 17 2017, In: BMC Genomics. 18, 1, 185.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    28 Scopus citations

  • Translation fidelity coevolves with longevity

    Ke, Z., Mallik, P., Johnson, A. B., Luna, F., Nevo, E., Zhang, Z. D., Gladyshev, V. N., Seluanov, A. & Gorbunova, V., Oct 2017, In: Aging cell. 16, 5, p. 988-993 6 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    51 Scopus citations
  • 2016

    Cell culture-based profiling across mammals reveals DNA repair and metabolism as determinants of species longevity

    Ma, S., Upneja, A., Galecki, A., Tsai, Y. M., Burant, C. F., Raskind, S., Zhang, Q., Zhang, Z. D., Seluanov, A., Gorbunova, V., Clish, C. B., Miller, R. A. & Gladyshev, V. N., Nov 22 2016, In: eLife. 5, NOVEMBER2016, e19130.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    64 Scopus citations

  • Integrated post-GWAS analysis sheds new light on the disease mechanisms of schizophrenia

    Lin, J. R., Cai, Y., Zhang, Q., Zhang, W., Nogales-Cadenas, R. & Zhang, Z. D., Dec 2016, In: Genetics. 204, 4, p. 1587-1600 14 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    35 Scopus citations

  • MicroRNA expression and gene regulation drive breast cancer progression and metastasis in PyMT mice

    Nogales-Cadenas, R., Cai, Y., Lin, J. R., Zhang, Q., Zhang, W., Montagna, C. & Zhang, Z. D., Jul 22 2016, In: Breast Cancer Research. 18, 1, 75.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    15 Scopus citations

  • Sensitivity of primary fibroblasts in culture to atmospheric oxygen does not correlate with species lifespan

    Patrick, A., Seluanov, M., Hwang, C., Tam, J., Khan, T., Morgenstern, A., Wiener, L., Vazquez, J. M., Zafar, H., Wen, R., Muratkalyeva, M., Doerig, K., Zagorulya, M., Cole, L., Catalano, S., Lobo Ladd, A. A. B., Coppi, A. A., Coskun, Y., Tian, X., Ablaeva, J., & 6 othersNevo, E., Gladyshev, V. N., Zhang, Z. D., Vijg, J., Seluanov, A. & Gorbunova, V., 2016, In: Aging. 8, 5, p. 841-847 7 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    12 Scopus citations

  • Systems-level analysis of human aging genes shed new light on mechanisms of aging

    Zhang, Q., Nogales-Cadenas, R., Lin, J. R., Zhang, W., Cai, Y., Vijg, J. & Zhang, Z. D., 2016, In: Human molecular genetics. 25, 14, p. 2934-2947 14 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    32 Scopus citations
  • 2015

    Comparative analysis of genome maintenance genes in naked mole rat, mouse, and human

    Macrae, S. L., Zhang, Q., Lemetre, C., Seim, I., Calder, R. B., Hoeijmakers, J., Suh, Y., Gladyshev, V. N., Seluanov, A., Gorbunova, V., Vijg, J. & Zhang, Z. D., Apr 1 2015, In: Aging cell. 14, 2, p. 288-291 4 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    52 Scopus citations

  • DNA repair in species with extreme lifespan differences

    MacRae, S. L., Croken, M. M. K., Calder, R. B., Aliper, A., Milholland, B., White, R. R., Zhavoronkov, A., Gladyshev, V. N., Seluanov, A., Gorbunova, V., Zhang, Z. D. & Vijg, J., 2015, In: Aging. 7, 12, p. 1171-1184 14 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    110 Scopus citations

  • INK4 locus of the tumor-resistant rodent, the naked mole rat, expresses a functional p15/p16 hybrid isoform

    Tian, X., Azpurua, J., Ke, Z., Augereau, A., Zhang, Z. D., Vijg, J., Gladyshev, V. N., Gorbunova, V. & Seluanov, A., Jan 27 2015, In: Proceedings of the National Academy of Sciences of the United States of America. 112, 4, p. 1053-1058 6 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    79 Scopus citations

  • RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships

    Nadel, J., Athanasiadou, R., Lemetre, C., Wijetunga, N. A., Ó Broin, P., Sato, H., Zhang, Z., Jeddeloh, J., Montagna, C., Golden, A., Seoighe, C. & Greally, J. M., Nov 16 2015, In: Epigenetics and Chromatin. 8, 1, 40.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    113 Scopus citations

  • Whole-Genome Sequencing and Integrative Genomic Analysis Approach on Two 22q11.2 Deletion Syndrome Family Trios for Genotype to Phenotype Correlations

    Chung, J. H., Cai, J., Suskin, B. G., Zhang, Z., Coleman, K. & Morrow, B. E., Aug 1 2015, In: Human Mutation. 36, 8, p. 797-807 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    15 Scopus citations
  • 2014

    Mosaic Epigenetic Dysregulation of Ectodermal Cells in Autism Spectrum Disorder

    Berko, E. R., Suzuki, M., Beren, F., Lemetre, C., Alaimo, C. M., Calder, R. B., Ballaban-Gil, K., Gounder, B., Kampf, K., Kirschen, J., Maqbool, S. B., Momin, Z., Reynolds, D. M., Russo, N., Shulman, L., Stasiek, E., Tozour, J., Valicenti-McDermott, M., Wang, S., Abrahams, B. S., & 9 othersHargitai, J., Inbar, D., Zhang, Z., Buxbaum, J. D., Molholm, S., Foxe, J. J., Marion, R. W., Auton, A. & Greally, J. M., May 2014, In: PLoS genetics. 10, 5, e1004402.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    83 Scopus citations
  • 2013

    Naked mole-rat has increased translational fidelity compared with the mouse, as well as a unique 28S ribosomal RNA cleavage

    Azpurua, J., Ke, Z., Chen, I. X., Zhang, Q., Ermolenko, D. N., Zhang, Z. D., Gorbunova, V. & Seluanov, A., Oct 22 2013, In: Proceedings of the National Academy of Sciences of the United States of America. 110, 43, p. 17350-17355 6 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    115 Scopus citations

  • SubNet: A Java application for subnetwork extraction

    Zhang, Q. & Zhang, Z. D., 2013, In: Bioinformatics. 29, 19, p. 2509-2511 3 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    14 Scopus citations

  • The origin, evolution, and functional impact of short insertion-deletion variants identified in 179 human genomes

    Montgomery, S. B., Goode, D. L., Kvikstad, E., Albers, C. A., Zhang, Z. D., Mu, X. J., Ananda, G., Howie, B., Karczewski, K. J., Smith, K. S., Anaya, V., Richardson, R., Davis, J., MacArthur, D. G., Sidow, A., Duret, L., Gerstein, M., Makova, K. D., Marchini, J., McVean, G., & 1 othersLunter, G., May 2013, In: Genome research. 23, 5, p. 749-761 13 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    168 Scopus citations
  • 2012

    An integrated encyclopedia of DNA elements in the human genome

    Principal investigators (steering committee), Boise State University and University of North Carolina at Chapel Hill Proteomics groups (data production and analysis), Broad Institute Group (data production and analysis), Cold Spring Harbor University of Geneva Center for Genomic Regulation Barcelona RIKEN Sanger Institute University of Lausanne GenomeInstitute of Singapore group (data production and analysis), Data coordination center at UC Santa Cruz (production data coordination), Duke University EBI University of Texas Austin University of North Carolina-Chapel Hill group (data production and analysis), Genome Institute of Singapore group (data production and analysis), HudsonAlpha Institute Caltech UC Irvine Stanford group (data production and analysis), Lawrence Berkeley National Laboratory group (targeted experimental validation), NHGRI groups (data production and analysis), Sanger Institute Washington University Yale University Center for Genomic Regulation Barcelona UCSC MIT University of Lausanne CNIO group (data production and analysis), Stanford-Yale Harvard University of Massachusetts Medical School University of Southern California/UC Davis group (data production and analysis), University of Albany SUNY group (data production and analysis), University of Chicago Stanford group (data production and analysis), University of Heidelberg group (targeted experimental validation), University of Massachusetts Medical School Bioinformatics group (data production and analysis), University of Washington University of Massachusetts Medical Center group (data production and analysis), Data Analysis Center (data analysis), The ENCODE Project Consortium, Data production leads (data production), & 3 othersLead analysts (data analysis), Writing group & NHGRI project management (scientific management), Sep 6 2012, In: Nature. 489, 7414, p. 57-74 18 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    12199 Scopus citations

  • A systematic survey of loss-of-function variants in human protein-coding genes

    MacArthur, D. G., Balasubramanian, S., Frankish, A., Huang, N., Morris, J., Walter, K., Jostins, L., Habegger, L., Pickrell, J. K., Montgomery, S. B., Albers, C. A., Zhang, Z. D., Conrad, D. F., Lunter, G., Zheng, H., Ayub, Q., DePristo, M. A., Banks, E., Hu, M., Handsaker, R. E., & 31 othersRosenfeld, J. A., Fromer, M., Jin, M., Mu, X. J., Khurana, E., Ye, K., Kay, M., Saunders, G. I., Suner, M. M., Hunt, T., Barnes, I. H. A., Amid, C., Carvalho-Silva, D. R., Bignell, A. H., Snow, C., Yngvadottir, B., Bumpstead, S., Cooper, D. N., Xue, Y., Romero, I. G., Wang, J., Li, Y., Gibbs, R. A., McCarroll, S. A., Dermitzakis, E. T., Pritchard, J. K., Barrett, J. C., Harrow, J., Hurles, M. E., Gerstein, M. B. & Tyler-Smith, C., Feb 17 2012, In: Science. 335, 6070, p. 823-828 6 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    915 Scopus citations
  • 2011

    ACT: Aggregation and correlation toolbox for analyses of genome tracks

    Jee, J., Rozowsky, J., Yip, K. Y., Lochovsky, L., Bjornson, R., Zhong, G., Zhang, Z., Fu, Y., Wang, J., Weng, Z. & Gerstein, M., Apr 2011, In: Bioinformatics. 27, 8, p. 1152-1154 3 p., btr092.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    27 Scopus citations

  • Identification of genomic indels and structural variations using split reads

    Zhang, Z. D., Du, J., Lam, H., Abyzov, A., Urban, A. E., Snyder, M. & Gerstein, M., Jul 25 2011, In: BMC Genomics. 12, 375.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    54 Scopus citations

  • Mapping copy number variation by population-scale genome sequencing

    Mills, R. E., Walter, K., Stewart, C., Handsaker, R. E., Chen, K., Alkan, C., Abyzov, A., Yoon, S. C., Ye, K., Cheetham, R. K., Chinwalla, A., Conrad, D. F., Fu, Y., Grubert, F., Hajirasouliha, I., Hormozdiari, F., Iakoucheva, L. M., Iqbal, Z., Kang, S., Kidd, J. M., & 352 othersKonkel, M. K., Korn, J., Khurana, E., Kural, D., Lam, H. Y. K., Leng, J., Li, R., Li, Y., Lin, C. Y., Luo, R., Mu, X. J., Nemesh, J., Peckham, H. E., Rausch, T., Scally, A., Shi, X., Stromberg, M. P., Sütz, A. M., Urban, A. E., Walker, J. A., Wu, J., Zhang, Y., Zhang, Z. D., Batzer, M. A., Ding, L., Marth, G. T., McVean, G., Sebat, J., Snyder, M., Wang, J., Ye, K., Eichler, E. E., Gerstein, M. B., Hurles, M. E., Lee, C., McCarroll, S. A., Korbel, J. O., Collins, F. S., Altshuler, D. L., Durbin, R. M., Abecasis, G. R., Bentley, D. R., Chakravarti, A., Clark, A. G., De La Vega, F. M., Donnelly, P., Egholm, M., Flicek, P., Gabriel, S. B., Gibbs, R. A., Knoppers, B. M., Lander, E. S., Lehrach, H., Mardis, E. R., Nickerson, D. A., Peltonen, L., Schafer, A. J., Sherry, S. T., Wilson, R. K., Deiros, D., Metzker, M., Muzny, D., Reid, J., Wheeler, D., Li, J., Jian, M., Li, G., Liang, H., Tian, G., Wang, B., Wang, W., Yang, H., Zhang, X., Zheng, H., Ambrogio, L., Bloom, T., Cibulskis, K., Fennell, T. J., Jaffe, D. B., Shefler, E., Sougnez, C. L., Gormley, N., Humphray, S., Kingsbury, Z., Koko-Gonzales, P., Stone, J., McKernan, K. J., Costa, G. L., Ichikawa, J. K., Lee, C. C., Sudbrak, R., Borodina, T. A., Dahl, A., Davydov, A. N., Marquardt, P., Mertes, F., Nietfeld, W., Rosenstiel, P., Schreiber, S., Soldatov, A. V., Timmermann, B., Tolzmann, M., Affourtit, J., Ashworth, D., Attiya, S., Bachorski, M., Buglione, E., Burke, A., Caprio, A., Celone, C., Clark, S., Conners, D., Desany, B., Gu, L., Guccione, L., Kao, K., Kebbel, A., Knowlton, J., Labrecque, M., McDade, L., Mealmaker, C., Minderman, M., Nawrocki, A., Niazi, F., Pareja, K., Ramenani, R., Riches, D., Song, W., Turcotte, C., Wang, S., Dooling, D., Fulton, L., Fulton, R., Weinstock, G., Burton, J., Carter, D. M., Churcher, C., Coffey, A., Cox, A., Palotie, A., Quail, M., Skelly, T., Stalker, J., Swerdlow, H. P., Turner, D., De Witte, A., Giles, S., Bainbridge, M., Challis, D., Sabo, A., Yu, F., Yu, J., Fang, X., Guo, X., Tai, S., Wu, H., Zheng, X., Zhou, Y., Garrison, E. P., Huang, W., Indap, A., Lee, W. P., Leong, W. F., Quinlan, A. R., Ward, A. N., Daly, M. J., DePristo, M. A., Ball, A. D., Banks, E., Browning, B. L., Garimella, K. V., Grossman, S. R., Hanna, M., Hartl, C., Kernytsky, A. M., Korn, J. M., Li, H., Maguire, J. R., McKenna, A., Nemesh, J. C., Philippakis, A. A., Poplin, R. E., Price, A., Rivas, M. A., Sabeti, P. C., Schaffner, S. F., Shlyakhter, I. A., Cooper, D. N., Ball, E. V., Mort, M., Phillips, A. D., Stenson, P. D., Makarov, V., Bustamante, C. D., Boyko, A., Degenhardt, J., Gravel, S., Gutenkunst, R. N., Kaganovich, M., Keinan, A., Lacroute, P., Ma, X., Reynolds, A., Clarke, L., Cunningham, F., Herrero, J., Keenen, S., Kulesha, E., Leinonen, R., McLaren, W. M., Radhakrishnan, R., Smith, R. E., Zalunin, V., Zheng-Bradley, X., Stütz, A. M., Bauer, M., Cox, T., Eberle, M., James, T., Kahn, S., Murray, L., Hyland, F. C., Manning, J. M., McLaughlin, S. F., Sakarya, O., Sun, Y. A., Tsung, E. F., Albrecht, M. W., Amstislavskiy, V. S., Herwig, R., Parkhomchuk, D. V., Agarwala, R., Khouri, H., Morgulis, A. O., Paschall, J. E., Phan, L. D., Rotmistrovsky, K. E., Sanders, R. D., Shumway, M. F., Xiao, C., Auton, A., Lunter, G., Marchini, J. 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    Research output: Contribution to journal › Article › peer-review

    Open Access
    858 Scopus citations
  • 2010

    A map of human genome variation from population-scale sequencing

    Altshuler, D. L., Durbin, R. M., Abecasis, G. R., Bentley, D. R., Chakravarti, A., Clark, A. G., Collins, F. S., De La Vega, F. M., Donnelly, P., Egholm, M., Flicek, P., Gabriel, S. B., Gibbs, R. A., Knoppers, B. M., Lander, E. S., Lehrach, H., Mardis, E. R., McVean, G. A., Nickerson, D. A., Peltonen, L., & 348 othersSchafer, A. J., Sherry, S. T., Wang, J., Wilson, R. K., Deiros, D., Metzker, M., Muzny, D., Reid, J., Wheeler, D., Wang, S. J., Li, J., Jian, M., Li, G., Li, R., Liang, H., Tian, G., Wang, B., Wang, J., Wang, W., Yang, H., Zhang, X., Zheng, H., Ambrogio, L., Bloom, T., Cibulskis, K., Fennell, T. J., Jaffe, D. B., Shefler, E., Sougnez, C. L., Bentley, I. D. R., Gormley, N., Humphray, S., Kingsbury, Z., Koko-Gonzales, P., Stone, J., Mc Kernan, K. J., Costa, G. L., Ichikawa, J. K., Lee, C. C., Sudbrak, R., Borodina, T. A., Dahl, A., Davydov, A. N., Marquardt, P., Mertes, F., Nietfeld, W., Rosenstiel, P., Schreiber, S., Soldatov, A. V., Timmermann, B., Tolzmann, M., Affourtit, J., Ashworth, D., Attiya, S., Bachorski, M., Buglione, E., Burke, A., Caprio, A., Celone, C., Clark, S., Conners, D., Desany, B., Gu, L., Guccione, L., Kao, K., Kebbel, A., Knowlton, J., Labrecque, M., McDade, L., Mealmaker, C., Minderman, M., Nawrocki, A., Niazi, F., Pareja, K., Ramenani, R., Riches, D., Song, W., Turcotte, C., Wang, S., Dooling, D., Fulton, L., Fulton, R., Weinstock, G., Burton, J., Carter, D. M., Churcher, C., Coffey, A., Cox, A., Palotie, A., Quail, M., Skelly, T., Stalker, J., Swerdlow, H. P., Turner, D., De Witte, A., Giles, S., Bainbridge, M., Challis, D., Sabo, A., Yu, F., Yu, J., Fang, X., Guo, X., Li, Y., Luo, R., Tai, S., Wu, H., Zheng, H., Zheng, X., Zhou, Y., Marth, G. T., Garrison, E. P., Huang, W., Indap, A., Kural, D., Lee, W. P., Leong, W. F., Quinlan, A. R., Stewart, C., Stromberg, M. P., Ward, A. N., Wu, J., Lee, C., Mills, R. E., Shi, X., Daly, M. J., DePristo, M. A., Ball, A. D., Banks, E., Browning, B. L., Garimella, K. V., Grossman, S. R., Handsaker, R. E., Hanna, M., Hartl, C., Kernytsky, A. M., Korn, J. M., Li, H., Maguire, J. R., McKenna, A., Nemesh, J. C., Philippakis, A. A., Poplin, R. E., Price, A., Rivas, M. A., Sabeti, P. C., Schaffner, S. F., Shlyakhter, I. A., Cooper, D. N., Ball, E. V., Mort, M., Phillips, A. D., Stenson, P. D., Sebat, J., Makarov, V., Ye, K., Yoon, S. C., Bustamante, C. D., Boyko, A., Degenhardt, J., Gravel, S., Gutenkunst, R. N., Kaganovich, M., Keinan, A., Lacroute, P., Ma, X., Reynolds, A., Clarke, L., Cunningham, F., Herrero, J., Keenen, S., Kulesha, E., Leinonen, R., McLaren, W. M., Radhakrishnan, R., Smith, R. E., Zalunin, V., Korbel, J. O., Stütz, A. M., Humphray, I. S., Bauer, M., Cheetham, R. K., Cox, T., Eberle, M., James, T., Kahn, S., Murray, L., Ye, K., Fu, Y., Hyland, F. C. L., Manning, J. M., Stephen, F. M., Peckham, H. E., Sakarya, O., Sun, Y. A., Tsung, E. F., Mark, A. B., Konkel, M. K., Walker, J. A., Albrecht, M. W., Amstislavskiy, V. S., Herwig, R., Parkhomchuk, D. V., Agarwala, R., Khouri, H. M., Morgulis, A. O., Paschall, J. E., Phan, L. D., Rotmistrovsky, K. E., Sanders, R. D., Shumway, M. F., Xiao, C., Gil, A. M., Auton, A., Iqbal, Z., Lunter, G., Marchini, J. L., Moutsianas, L., Myers, S., Tumian, A., Knight, J., Winer, R., Craig, D. W., Beckstrom-Sternberg, S. M., Christoforides, A., Kurdoglu, A. A., Pearson, J. V., Sinari, S. A., Tembe, W. D., Haussler, D., Hinrichs, A. S., Katzman, S. J., Kern, A., Kuhn, R. M., Przeworski, M., Hernandez, R. D., Howie, B., Kelley, J. L., Melton, S. C., Li, Y., Anderson, P., Blackwell, T., Chen, W., Cookson, W. O., Ding, J., Kang, H. M., Lathrop, M., Liang, L., Moffatt, M. F., Scheet, P., Sidore, C., Snyder, M., Zhan, X., Zöllner, S., Awadalla, P., Casals, F., Idaghdour, Y., Keebler, J., Stone, E. A., Zilversmit, M., Jorde, L., Xing, J., Eichler, E. E., Aksay, G., Alkan, C., Hajirasouliha, I., Hormozdiari, F., Kidd, J. M., CenkSahinalp, S., Sudmant, P. 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    Research output: Contribution to journal › Article › peer-review

    Open Access
    6190 Scopus citations

  • Detection of copy number variation from array intensity and sequencing read depth using a stepwise Bayesian model

    Zhang, Z. D. & Gerstein, M. B., Oct 31 2010, In: BMC bioinformatics. 11, 539.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    5 Scopus citations