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Emmanuel N. Asare, Ph.D.

20162023

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  • The Helicobacter pylori Genome Project: insights into H. pylori population structure from analysis of a worldwide collection of complete genomes

    Thorell, K., Muñoz-Ramírez, Z. Y., Wang, D., Sandoval-Motta, S., Boscolo Agostini, R., Ghirotto, S., Torres, R. C., Romero-Gallo, J., Krishna, U., Peek, R. M., Piazuelo, M. B., Raaf, N., Bentolila, F., Aftab, H., Akada, J., Matsumoto, T., Haesebrouck, F., Colanzi, R. P., Bartelli, T. F., Nunes, D. N., & 271 othersPelosof, A., Sztokfisz, C. Z., Dias-Neto, E., Assumpção, P. P., Tishkov, I., Mabeku, L. B. K., Goodman, K. J., Geary, J., Cromarty, T. J., Price, N. L., Quilty, D., Corvalan, A. H., Serrano, C. A., Gonzalez, R., Riquelme, A., García-Cancino, A., Parra-Sepúlveda, C., Bernal, G., Castillo, F., Goldstein, A. M., Hu, N., Taylor, P. R., Bravo, M. M., Pazos, A., Bravo, L. E., Wilson, K. T., Fox, J. G., Ramírez-Mayorga, V., Molina-Castro, S., Durán-Bermúdez, S., Campos-Núñez, C., Chaves-Cervantes, M., Tshibangu-Kabamba, E., Tumba, G. D., Tshimpi-Wola, A., de Jesus Ngoma-Kisoko, P., Ngoyi, D. M., Cruz, M., Hosking, C., Abreu, J. J., Varon, C., Benejat, L., Secka, O., Link, A., Malfertheiner, P., Adinortey, M. B., Bockarie, A. S., Adinortey, C. A., Ofori, E. G., Sgouras, D. N., Martinez-Gonzalez, B., Michopoulos, S., Georgopoulos, S., Hernandez, E., Tacatic, B. V., Aguilar, M., Dominguez, R. L., Morgan, D. R., Harðardóttir, H., Gunnarsdóttir, A. I., Guðjónsson, H., Jónasson, J. G., Björnsson, E. S., Ballal, M., Shetty, V., Miftahussurur, M., Sugihartono, T., Alfaray, R. I., Waskito, L. A., Fauzia, K. A., Syam, A. F., Maulahela, H., Malekzadeh, R., Sotoudeh, M., Peretz, A., Azrad, M., On, A., De Re, V., Zanussi, S., Cannizzaro, R., Canzonieri, V., Shimura, T., Tokunaga, K., Osaki, T., Kamiya, S., Jadallah, K., Matalka, I., Igissinov, N., Moldobaeva, M. S., Rakhat, A., Choi, I. J., Kim, J. G., Kim, N., Song, M., Leja, M., Vangravs, R., Šķenders, Ģ., Rudzīte, D., Rūdule, A., Vanags, A., Kikuste, I., Kupcinskas, J., Skieceviciene, J., Jonaitis, L., Kiudelis, G., Jonaitis, P., Kiudelis, V., Varkalaite, G., Vadivelu, J., Loke, M. F., Vellasamy, K. M., Herrera-Goepfert, R., Alonso-Larraga, J. O., Yee, T. T., Htet, K., Matsuhisa, T., Shrestha, P. K., Ansari, S., Abiodun, O., Jemilohun, C., Akande, K. O., Olu-Abiodun, O., Magaji, F. A., Omotoso, A., Osuagwu, C. C., Okonkwo, U., Owoseni, O. O., Castaneda, C., Castillo, M., Velapatino, B., Gilman, R. H., Krzyżek, P., Gościniak, G., Pawełka, D., Korona-Glowniak, I., Cichoz-Lach, H., Oleastro, M., Figueiredo, C., Machado, J. C., Ferreira, R. M., Bordin, D. S., Livzan, M. A., Tsukanov, V. V., Tan, P., Yeoh, K. G., Zhu, F., Ally, R., Haas, R., Montes, M., Fernández-Reyes, M., Tamayo, E., Lizasoain, J., Bujanda, L., Lario, S., Ramírez-Lázaro, M. J., Calvet, X., Brunet-Mas, E., Domper-Arnal, M. J., García-Mateo, S., Abad-Baroja, D., Delgado-Guillena, P., Moreira, L., Botargues, J., Pérez-Martínez, I., Barreiro-Alonso, E., Flores, V., Gisbert, J. P., Muro, E. A., Linares, P., Martin, V., Alcoba, L., Fleitas-Kanonnikoff, T., Altayeb, H. N., Engstrand, L., Enroth, H., Keller, P. M., Wagner, K., Pohl, D., Lee, Y. C., Liou, J. M., Wu, M. S., Kocazeybek, B., Sarıbas, S., Tasçı, İ., Demiryas, S., Kepil, N., Quiel, L., Villagra, M., Norton, M., Johnson, D., Huang, R. J., Hwang, J. H., Szymczak, W., Rajagopalan, S., Asare, E., Jacobs, W. R., In, H., Bollag, R., Lopez, A., Kruse, E. J., White, J., Graham, D. Y., Lane, C., Gao, Y., Fields, P. I., Gold, B. D., Cruz-Correa, M., González-Pons, M., Rodriguez, L. M., Tuan, V. P., Dung, H. D. Q., Binh, T. T., Trang, T. T. H., Van Khien, V., Chen, X., Raley, C., Kessing, B., Zhao, Y., Tran, B., Gutiérrez-Escobar, A. J., Wan, Y., Hicks, B., Zhu, B., Yu, K., Zhu, B., Yeager, M., Hutchinson, A., Teshome, K., Jones, K., Luo, W., Jehanne, Q., Katsura, Y., Gonzalez-Hormazabal, P., Didelot, X., Sheppard, S., Tarazona-Santos, E., Mariño-Ramírez, L., Loh, J. T., Backert, S., Naumann, M., Abnet, C. C., Smet, A., Berg, D. E., Chiner-Oms, Á., Comas, I., Martínez-Martínez, F. J., Zamudio, R., Lehours, P., Megraud, F., Yahara, K., Blaser, M. J., Vincze, T., Morgan, R. D., Roberts, R. J., Chanock, S. J., Dekker, J. P., Torres, J., Cover, T. L., Noureen, M., Fischer, W., Vale, F. F., Cherry, J. L., Osada, N., Fukuyo, M., Arita, M., Yamaoka, Y., Kobayashi, I., Uchiyama, I., Falush, D., Camargo, M. C. & Rabkin, C. S., Dec 2023, In: Nature communications. 14, 1, 8184.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    3 Scopus citations

  • Capturing Structural Variants of Herpes Simplex Virus Genome in Full Length by Oxford Nanopore Sequencing

    Saranathan, R., Asare, E., Leung, L., de Oliveira, A. P., Kaugars, K. E., Mulholland, C. V., Lukose, R., Berney, M. & Jacobs, W. R., Sep 2022, In: Microbiology Spectrum. 10, 5

    Research output: Contribution to journal › Article › peer-review

    Open Access
    4 Scopus citations

  • Multiple genetic paths including massive gene amplification allow Mycobacterium tuberculosis to overcome loss of ESX-3 secretion system substrates

    Wang, L., Asare, E., Shetty, A. C., Sanchez-Tumbaco, F., Edwards, M. R., Saranathan, R., Weinrick, B., Xu, J., Chen, B., Bénard, A., Dougan, G., Leung, D. W., Amarasinghe, G. K., Chan, J., Basler, C. F., Jacobs, W. R. & Tufariello, J. A. M., Feb 22 2022, In: Proceedings of the National Academy of Sciences of the United States of America. 119, 8, e2112608119.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    7 Scopus citations

  • Helicobacter pylori Infections in the Bronx, New York: Surveying antibiotic susceptibility and strain lineage by whole-genome sequencing

    Saranathan, R., Levi, M. H., Wattam, A. R., Malek, A., Asare, E., Behin, D. S., Pan, D. H., Jacobs, W. R. & Szymczak, W. A., 2020, In: Journal of Clinical Microbiology. 58, 3, e01591-19.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    22 Scopus citations

  • Nanoluciferase reporter mycobacteriophage for sensitive and rapid detection of mycobacterium tuberculosis drug susceptibility

    Jain, P., Garing, S., Verma, D., Saranathan, R., Clute-Reinig, N., Gadwa, J., Peterson, C., Hermansky, G., Fernandez, A. A., Asare, E., Weisbrod, T., Spencer, E., Mulholland, C. V., Berney, M., Bell, D., Nichols, K. P., Le Ny, A. L. M., Ordway, D., Jacobs, W. R., Somoskovi, A., & 1 othersMinch, K. J., Nov 2020, In: Journal of Bacteriology. 202, 22, e00411-20.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    9 Scopus citations
View all 8 Research outputs